BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B06LP1|AL428003
(1130 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1472 2202 0.0
>3x_Contig1472
Length = 10822
Score = 2202 bits (1109), Expect = 0.0
Identities = 1126/1131 (99%), Gaps = 2/1131 (0%)
Strand = Plus / Minus
Query: 1 gatcaatgcttgagtaacatctagagttttgcccttttcacagaccaagtatggagattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6322 gatcaatgcttgagtaacatctagagttttgcccttttcacagaccaagtatggagattc 6263
Query: 61 gatggtaatcttaccattcttaattttggttggaatcttgaacttgtttcttagagttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6262 gatggtaatcttaccattcttaattttggttggaatcttgaacttgtttcttagagttgg 6203
Query: 121 ttccagagaatgtatcataggcacatcttcttcttctgggatttgaccaccacgagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6202 ttccagagaatgtatcataggcacatcttcttcttctgggatttgaccaccacgagagta 6143
Query: 181 tacaataccggctggaatggtaaaagacaatggagcctttgattttggtctggagaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6142 tacaataccggctggaatggtaaaagacaatggagcctttgattttggtctggagaaatc 6083
Query: 241 agctctcacatatgccttgaagtaatcttccactacatcgacaggttcgttggtaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6082 agctctcacatatgccttgaagtaatcttccactacatcgacaggttcgttggtaaataa 6023
Query: 301 tagaccagtaacaccagaacagtgcttacatagtttggccaagttctccttgtactcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6022 tagaccagtaacaccagaacagtgcttacatagtttggccaagttctccttgtactcttc 5963
Query: 361 ctctggcttttcacctaacgctttcaccaacaccttcctcttacccatgattaacttgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5962 ctctggcttttcacctaacgctttcaccaacaccttcctcttacccatgattaacttgga 5903
Query: 421 tccaacccaagaacttctaatctcttgcaaaactggagttctcacatcttccaaatgtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5902 tccaacccaagaacttctaatctcttgcaaaactggagttctcacatcttccaaatgtaa 5843
Query: 481 aacccaagcgtatctgaaagaatccaaggcttctctaacttcatcgaatatcctttcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5842 aacccaagcgtatctgaaagaatccaaggcttctctaacttcatcgaatatcctttcctt 5783
Query: 541 gttctctctacccttcttatcggtttgggccaatgtaaccaactttgaacgcttagatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5782 gttctctctacccttcttatcggtttgggccaatgtaaccaactttgaacgcttagatct 5723
Query: 601 tggcatcgtatctgggttggtatatgtagtagcttgatgataaagagtaacgaaaagtaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5722 tggcatcgtatctgggttggtatatgtagtagcttgatgataaagagtaacgaaaagtaa 5663
Query: 661 acaattatcagaacactattcaattacagaagagagataaataaagaggaatacaactga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5662 acaattatcagaacactattcaattacagaagagagataaataaagaggaatacaactga 5603
Query: 721 tagaatatagcgattagtactgttgatcagtttaaactatgaaaggtccatcgagtagat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5602 tagaatatagcgattagtactgttgatcagtttaaactatgaaaggtccatcgagtagat 5543
Query: 781 gcgatgagatgagctttctcaaactgaaaaatttgcgcctttctttttctttctagttgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 gcgatgagatgagctttctcaaactgaaaaatttgcgcctttctttttctttctagttgt 5483
Query: 841 gagtcacgtgatttgatttttccaaacggaaagtaacgacctctgacacaaagtgaatcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5482 gagtcacgtgatttgatttttccaaacggaaagtaacgacctctgacacaaagtgaatcg 5423
Query: 901 gtaagacatataccggctcttttgcaatgctctaggg-cattctcataagctcggttaga 959
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5422 gtaagacatataccggctcttttgcaatgctctagggccattctcataagctcggttaga 5363
Query: 960 gaggtttattctaaggaactgcaaaaccaaactccggtatgaattcccttgactgatttc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5362 gaggtttattctaaggaactgcaaaaccaaactccggtatgaattcccttgactgatttc 5303
Query: 1020 tgagtytctcactcattgccaatgagamaatagatctcaattcaacacaaatatcaagac 1079
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5302 tgagtctctcactcattgccaatgagacaatagatctcaattcaacacaaatatcaagac 5243
Query: 1080 tagaaaggsacagatagggcatgatcgtgttatcgggcaagtagatatagt 1130
|||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5242 tagaaaggcacagatagggcatgatcgtg-tatcgggcaagtagatatagt 5193
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,291
Number of Sequences: 1807
Number of extensions: 10291
Number of successful extensions: 178
Number of sequences better than 1.0e-20: 1
length of query: 1130
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1114
effective length of database: 10,329,639
effective search space: 11507217846
effective search space used: 11507217846
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.8 bits)